Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Probe geometry doc #660

Merged
merged 8 commits into from
Oct 24, 2023
Merged

Probe geometry doc #660

merged 8 commits into from
Oct 24, 2023

Conversation

GaelleChapuis
Copy link
Contributor

Added to doc page on loading raw ephys data

@GaelleChapuis GaelleChapuis requested a review from oliche October 11, 2023 07:06
Copy link
Member

@oliche oliche left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Olà, thanks for the contribution a few things to change:

  • channel geometry and histology are two different things and should be separate examples. The former is raw data and just lateral_um and axial_um relative to the probe tip while the latter is full histology. This is a distinction that seems subtle but has large implications
  • regarding the full file: ibllib.io.spikeglx and ibllib.dsp.voltage are deprecated and are in the ibl-neuropixel repository, in spikeglx and neurodsp.voltage respectively.

@GaelleChapuis
Copy link
Contributor Author

lateral_um and axial_um are now used in the documentation.
Imports are done via spikeglx and neurodsp

@GaelleChapuis GaelleChapuis merged commit 1712805 into develop Oct 24, 2023
2 checks passed
@GaelleChapuis GaelleChapuis deleted the docs branch October 24, 2023 13:17
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

3 participants